I'm not sure how to put the actual generator into a Server, but what I did (for planetoids as well, ironically), was this:
1. Put the map generator and any of it's files into a folder.
2. Run said generator. Make sure to name the map "world"
3. once it's done, take it's "world" file and place it in your server file, where the .jar is located
4. boom! once you run the server, you'll be in the world the program generated.