You can use the BiomeTerrain Modifier to change the frequency, rarity, and deposit size of resources. If you don't touch any of the terrain settings and just the deposit mods, worlds should generate normally.
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"Some scientists claim that hydrogen, because it is so plentiful, is the basic building block of the universe. I dispute that. I say that there is more stupidity than hydrogen, and that is the basic building block of the universe." -Frank Zappa
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